Welcome to the Neuromorphological File Specification

Note

For additional information, visit MBF Bioscience’s user forum for the Neuromorphological File Specification.

Table of Contents

• Neuromorphological File Specification
  • 1. Definitions
  • 2. Introduction to the Neuromorphological File Format
  • 3. Neuromorphological File Contents
    • 3.1 Coordinate Space
  • 4. Header Elements
    • 4.1 <description>
    • 4.2 <filefacts>
    • 4.3 <sparcdata>
    • 4.4 <property name=”TimePointManager”>
    • 4.5 <images>
    • 4.6 <thumbnail>
  • 5.Trace Data
    • 5.1 Common Components
      • 5.1.1 Color
      • 5.1.2 <point>
      • 5.1.3 <property name=”Channel”>
      • 5.1.4 <property name=”Set”>
    • 5.2 <marker>
    • 5.3 Punctum
    • 5.4 <contour>
    • 5.5 Neurons
      • 5.5.1 <tree>
        • 5.5.1.1 <spine>
        • 5.5.1.2 <varicosity>
      • 5.5.2 Somas and Cell Bodies
    • 5.6 Vascular Networks
      • 5.6.1 <vessel>
    • 5.7 Annotations
      • 5.7.1 <arrow>
      • 5.7.2 <text>
      • 5.7.3 <scalebar>
  • 6. References
• Release Notes
  • Version 4.0.0 (September 16, 2020)
• Credits
  • Acknowledgments
  • Authors
• Legal
  • Copyright
  • License
    • Attribution
    • NonCommercial
    • NoDerivatives